Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: RPAP1 ENSSSCG00000004745

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Description

RNA polymerase II associated protein 1 [Source:VGNC Symbol;Acc:VGNC:92417]

Location

Primary_assembly 1: 129,838,585-129,857,041 forward strand.

Sscrofa11.1:CM000812.5

About this gene

This gene has 2 transcripts (splice variants) and 199 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000046153.2	RPAP1-201	4692	1393aa	ENSSSCP00000043917.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AIU1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000005244.4	RPAP1-202	3942	1074aa	ENSSSCP00000005117.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1SSV8	-

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Summary

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