Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: FIG4 ENSSSCG00000004405

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Description

FIG4 phosphoinositide 5-phosphatase [Source:VGNC Symbol;Acc:VGNC:88136]

Location

Primary_assembly 1: 75,694,151-75,847,528 forward strand.

Sscrofa11.1:CM000812.5

About this gene

This gene has 7 transcripts (splice variants), 204 orthologues and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000004868.4	FIG4-207	3710	910aa	ENSSSCP00000004753.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0MMB3 F1RSY7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000094962.1	FIG4-201	6364	849aa	ENSSSCP00000075856.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0SZI8 A0A8W4F958	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000091698.1	FIG4-203	3231	792aa	ENSSSCP00000076552.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FBA8	-
ENSSSCT00000047387.3	FIG4-204	2998	864aa	ENSSSCP00000040498.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A982	-
ENSSSCT00000031596.4	FIG4-205	2920	838aa	ENSSSCP00000025476.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3LN04	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000103888.1	FIG4-202	2883	878aa	ENSSSCP00000080103.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FMH3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000081749.2	FIG4-206	2734	776aa	ENSSSCP00000065157.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QT39	-

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Summary

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