Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: PRDM1 ENSSSCG00000004369

.

Description

PR/SET domain 1 [Source:VGNC Symbol;Acc:VGNC:91772]

Location

Primary_assembly 1: 72,311,880-72,335,466 forward strand.

Sscrofa11.1:CM000812.5

About this gene

This gene has 4 transcripts (splice variants), 210 orthologues and 37 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000037769.3	PRDM1-202	4920	842aa	ENSSSCP00000057386.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BLU1 A0A4X1VE26	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000004830.4	PRDM1-204	5053	828aa	ENSSSCP00000004716.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VA80 F1RYP9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000053050.3	PRDM1-201	4675	694aa	ENSSSCP00000049758.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B0W9 A0A4X1VA87	-
ENSSSCT00000038421.3	PRDM1-203	4135	785aa	ENSSSCP00000056637.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BJT0 A0A4X1VDZ6	-

.

Summary

.

.