Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: RNF125 ENSSSCG00000003729

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Description

ring finger protein 125 [Source:VGNC Symbol;Acc:VGNC:92352]

Location

Primary_assembly 6: 115,857,721-115,903,677 forward strand.

Sscrofa11.1:CM000817.5

About this gene

This gene has 4 transcripts (splice variants), 131 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000080973.2	RNF125-203	2092	227aa	ENSSSCP00000062653.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QEN7 A0A8D1L1F5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000035939.4	RNF125-204	4801	212aa	ENSSSCP00000028585.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1AQE6 K7GL56	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000072361.2	RNF125-202	4745	216aa	ENSSSCP00000069247.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0W7H2 A0A8D1Z530	-
ENSSSCT00000004129.5	RNF125-201	1072	219aa	ENSSSCP00000004036.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1SAL7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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