Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SMG9 ENSSSCG00000003068

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Description

SMG9 nonsense mediated mRNA decay factor [Source:VGNC Symbol;Acc:VGNC:93251]

Location

Primary_assembly 6: 50,551,057-50,569,697 reverse strand.

Sscrofa11.1:CM000817.5

About this gene

This gene has 2 transcripts (splice variants) and 185 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000036850.3	SMG9-201	4061	521aa	ENSSSCP00000049748.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B0K1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000003405.5	SMG9-202	2792	520aa	ENSSSCP00000003322.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1RV96 F1RMV1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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