Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: MMP2 ENSSSCG00000002829

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Description

matrix metallopeptidase 2 [Source:VGNC Symbol;Acc:VGNC:90274]

Gene Synonyms

MMP-2

Location

Primary_assembly 6: 30,058,595-30,086,982 reverse strand.

Sscrofa11.1:CM000817.5

About this gene

This gene has 3 transcripts (splice variants), 207 orthologues and 20 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000081754.1	MMP2-203	2576	610aa	ENSSSCP00000073458.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1U8B7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000003130.5	MMP2-201	3406	584aa	ENSSSCP00000003049.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D2BHP9 F1RF11	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000077292.2	MMP2-202	3352	566aa	ENSSSCP00000070473.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R8M2 A0A8D0NI19	-

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Summary

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