Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: EFHC1 ENSSSCG00000002620

.

Description

EF-hand domain containing 1 [Source:VGNC Symbol;Acc:VGNC:87570]

Location

Primary_assembly 7: 46,239,230-46,348,667 forward strand.

Sscrofa11.1:CM000818.5

About this gene

This gene has 4 transcripts (splice variants), 200 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000002907.5	EFHC1-202	4748	640aa	ENSSSCP00000002828.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A480I608 A0A8D2A5J1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000104932.1	EFHC1-204	4595	640aa	ENSSSCP00000076928.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1GF34 A0A8W4FCD9	-
ENSSSCT00000104826.1	EFHC1-203	4460	544aa	ENSSSCP00000078662.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FHE9	-
ENSSSCT00000049511.3	EFHC1-201	4337	555aa	ENSSSCP00000045853.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287API1	-

.

Summary

.

.