Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TRIP11 ENSSSCG00000002445

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Description

thyroid hormone receptor interactor 11 [Source:VGNC Symbol;Acc:VGNC:94437]

Location

Primary_assembly 7: 113,524,430-113,600,088 reverse strand.

Sscrofa11.1:CM000818.5

About this gene

This gene has 3 transcripts (splice variants), 220 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000038260.3	TRIP11-203	8831	1974aa	ENSSSCP00000037915.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A2D7 A0A8D2BL36	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000044128.2	TRIP11-201	8176	1890aa	ENSSSCP00000053345.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BA16 A0A8D0ZWP2	-
ENSSSCT00000092707.1	TRIP11-202	6386	1945aa	ENSSSCP00000075531.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4F9M2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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