Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SCAMP5 ENSSSCG00000001887

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Description

secretory carrier membrane protein 5 [Source:VGNC Symbol;Acc:VGNC:92609]

Location

Primary_assembly 7: 58,550,198-58,559,310 reverse strand.

Sscrofa11.1:CM000818.5

About this gene

This gene has 6 transcripts (splice variants), 276 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000095254.1	SCAMP5-202	756	251aa	ENSSSCP00000075943.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FCB9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000089481.2	SCAMP5-204	3282	242aa	ENSSSCP00000069574.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QXB4	-
ENSSSCT00000066974.2	SCAMP5-205	3240	243aa	ENSSSCP00000063279.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QYI7 A0A8D1RHH6	-
ENSSSCT00000002113.5	SCAMP5-206	3216	235aa	ENSSSCP00000002063.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1WZ88 F1SJ51	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000080094.2	SCAMP5-203	3116	244aa	ENSSSCP00000068143.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QTI2	-
ENSSSCT00000068662.2	SCAMP5-201	2888	168aa	ENSSSCP00000063638.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QNH7 A0A8D1H6N3	-

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Summary

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