Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: VEGFA ENSSSCG00000001695

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Description

vascular endothelial growth factor A [Source:VGNC Symbol;Acc:VGNC:94815]

Location

Primary_assembly 7: 38,746,052-38,761,366 forward strand.

Sscrofa11.1:CM000818.5

About this gene

This gene has 5 transcripts (splice variants), 254 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000064013.3	VEGFA-203	1947	394aa	ENSSSCP00000054926.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BFL9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000074202.2	VEGFA-201	2464	316aa	ENSSSCP00000063371.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QHM5	-
ENSSSCT00000073564.2	VEGFA-204	2071	326aa	ENSSSCP00000072498.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R854	-
ENSSSCT00000001892.4	VEGFA-202	1875	370aa	ENSSSCP00000001845.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2C9F342	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000068911.1	VEGFA-205	555	184aa	ENSSSCP00000068842.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1IL81 A0A8D1K7V9	-

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Summary

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