Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: DDX39B ENSSSCG00000001400

.

Description

DExD-box helicase 39B [Source:VGNC Symbol;Acc:VGNC:109422]

Location

Primary_assembly 7: 23,658,088-23,670,031 reverse strand.

Sscrofa11.1:CM000818.5

About this gene

This gene has 6 transcripts (splice variants), 147 orthologues and 38 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000032673.4	DDX39B-205	1637	470aa	ENSSSCP00000031099.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	K7GT57	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000037196.3	DDX39B-201	2497	397aa	ENSSSCP00000052489.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B7P5 A0A8D0Z3C6	-
ENSSSCT00000037952.3	DDX39B-202	2252	416aa	ENSSSCP00000031843.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZJT1	-
ENSSSCT00000046178.3	DDX39B-203	2249	415aa	ENSSSCP00000054460.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BD57	-
ENSSSCT00000001529.5	DDX39B-206	1794	428aa	ENSSSCP00000001487.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B9TSQ2 Q29024	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000042719.3	DDX39B-204	1251	416aa	ENSSSCP00000041973.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287ADC3	-

.

Summary

.

.