Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: CDKAL1 ENSSSCG00000001080

.

Description

CDK5 regulatory subunit associated protein 1 like 1 [Source:VGNC Symbol;Acc:VGNC:86509]

Location

Primary_assembly 7: 15,910,666-16,626,276 forward strand.

Sscrofa11.1:CM000818.5

About this gene

This gene has 5 transcripts (splice variants), 213 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000001175.5	CDKAL1-205	3264	578aa	ENSSSCP00000001150.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0ISV4 F1RUG0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000040980.2	CDKAL1-204	2168	551aa	ENSSSCP00000036101.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZXA8 A0A8D0MJV4	-
ENSSSCT00000042404.3	CDKAL1-202	1892	564aa	ENSSSCP00000040203.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A8T1 A0A8D0R6F4	-
ENSSSCT00000063418.2	CDKAL1-203	1836	550aa	ENSSSCP00000056793.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BJK8 A0A8D0MLM0	-
ENSSSCT00000066464.2	CDKAL1-201	701	96aa	ENSSSCP00000072139.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VN76 A0A5G2RJP4	-

.

Summary

.

.