Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CLEC7A ENSSSCG00000000648

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Description

C-type lectin domain containing 7A [Source:VGNC Symbol;Acc:VGNC:86758]

Location

Primary_assembly 5: 61,832,954-61,846,434 forward strand.

Sscrofa11.1:CM000816.5

About this gene

This gene has 5 transcripts (splice variants), 221 orthologues and 22 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000000701.6	CLEC7A-204	2014	247aa	ENSSSCP00000000686.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0XYQ3 F1SPE0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000000700.6	CLEC7A-202	1719	201aa	ENSSSCP00000000685.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1E1X5 C0JP80	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000033773.4	CLEC7A-203	1604	168aa	ENSSSCP00000030150.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0U9T3 C0JP81	-
ENSSSCT00000000699.5	CLEC7A-205	1479	189aa	ENSSSCP00000000684.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1K7V2 F1SPE2	-
ENSSSCT00000086876.2	CLEC7A-201	307	77aa	ENSSSCP00000066448.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QNH4 A0A8D0QI25	-

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Summary

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