Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: YBX3 ENSSSCG00000000633

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Description

Y-box binding protein 3 [Source:VGNC Symbol;Acc:VGNC:95021]

Location

Primary_assembly 5: 61,337,862-61,361,279 forward strand.

Sscrofa11.1:CM000816.5

About this gene

This gene has 3 transcripts (splice variants), 131 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000027246.4	YBX3-201	1923	380aa	ENSSSCP00000026338.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0QKU4 I3LQF8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000086287.2	YBX3-202	1893	370aa	ENSSSCP00000065996.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QPK7 A0A8D1QSK6	-
ENSSSCT00000000680.5	YBX3-203	1744	312aa	ENSSSCP00000000665.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1V343 F1SQ46	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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