Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: cntn3a.1 ENSSSAG00000074597

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Description

contactin 3a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-081030-10]

Location

Primary_assembly 15: 78,240,820-78,348,445 reverse strand.

Ssal_v3.1:HG993274.1

About this gene

This gene has 10 transcripts (splice variants), 64 orthologues and 134 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSAT00000136529.2	cntn3a.1-210	5178	1037aa	ENSSSAP00000101989.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1S3ME13	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSAT00000136719.2	cntn3a.1-209	3637	1004aa	ENSSSAP00000102173.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSSSAT00000136207.2	cntn3a.1-204	3111	1036aa	ENSSSAP00000101680.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSSSAT00000136704.2	cntn3a.1-206	3069	1022aa	ENSSSAP00000102159.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSSSAT00000136551.2	cntn3a.1-208	3057	1018aa	ENSSSAP00000102011.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSSSAT00000136588.2	cntn3a.1-205	3009	1002aa	ENSSSAP00000102048.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSSSAT00000135964.2	cntn3a.1-207	3000	999aa	ENSSSAP00000101440.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSSSAT00000136734.2	cntn3a.1-202	2985	994aa	ENSSSAP00000102188.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSSSAT00000136694.2	cntn3a.1-203	2952	983aa	ENSSSAP00000102149.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSSSAT00000136765.2	cntn3a.1-201	2883	960aa	ENSSSAP00000102219.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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