Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: smoc1 ENSSSAG00000000073

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Description

SPARC related modular calcium binding 1 [Source:ZFIN;Acc:ZDB-GENE-110310-7]

Location

Primary_assembly 1: 3,967,614-4,105,509 reverse strand.

Ssal_v3.1:HG993260.1

About this gene

This gene has 8 transcripts (splice variants), 202 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSSSAT00000173271.1	smoc1-208	2926	503aa	ENSSSAP00000137199.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSAT00000159604.1	smoc1-206	2686	496aa	ENSSSAP00000171372.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSSSAT00000253728.1	smoc1-207	2649	486aa	ENSSSAP00000152468.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSSSAT00000253112.1	smoc1-204	2329	485aa	ENSSSAP00000141570.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSSSAT00000190668.1	smoc1-205	2281	469aa	ENSSSAP00000159923.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSSSAT00000000108.2	smoc1-202	2022	469aa	ENSSSAP00000000084.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSSSAT00000185150.1	smoc1-203	1890	425aa	ENSSSAP00000122956.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSSSAT00000000109.2	smoc1-201	1452	483aa	ENSSSAP00000000085.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-

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Summary

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