Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: FOXA1 ENSSHAG00000001593

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Description

forkhead box A1 [Source:HGNC Symbol;Acc:HGNC:5021]

Location

Primary_assembly 2: 338,139,138-338,163,027 reverse strand.

mSarHar1.11:LR735555.1

About this gene

This gene has 4 transcripts (splice variants), 146 orthologues and 32 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSHAT00000001809.2	FOXA1-201	1961	492aa	ENSSHAP00000001789.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3VF35	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSHAT00000036278.1	FOXA1-202	3352	466aa	ENSSHAP00000040347.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7N4PQ64	-
ENSSHAT00000026363.1	FOXA1-204	1741	432aa	ENSSHAP00000031988.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7N4P401	-
ENSSHAT00000041432.1	FOXA1-203	1681	450aa	ENSSHAP00000022522.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7N4UWY0	-

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Summary

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