Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ctnna1 ENSSFOG00015015186

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Description

catenin (cadherin-associated protein), alpha 1 [Source:ZFIN;Acc:ZDB-GENE-991207-24]

Location

Primary_assembly 13: 627,375-699,182 forward strand.

fSclFor1.1:LR584078.1

About this gene

This gene has 10 transcripts (splice variants), 238 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSFOT00015070050.1	ctnna1-206	3887	956aa	ENSSFOP00015076289.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C9WH10	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSFOT00015023933.2	ctnna1-201	4353	906aa	ENSSFOP00015023674.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C9RV13	-
ENSSFOT00015073506.1	ctnna1-202	4182	849aa	ENSSFOP00015069703.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C9W3S9	-
ENSSFOT00015041400.1	ctnna1-207	3551	844aa	ENSSFOP00015053575.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C9TH08	-
ENSSFOT00015064432.1	ctnna1-203	3349	910aa	ENSSFOP00015069207.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C9W5S2	-
ENSSFOT00015046011.1	ctnna1-204	3202	475aa	ENSSFOP00015057408.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C9TZC8	-
ENSSFOT00015069017.1	ctnna1-208	2876	619aa	ENSSFOP00015073647.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C9WGS3	-
ENSSFOT00015052731.1	ctnna1-209	2618	533aa	ENSSFOP00015039452.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C9SLM8	-
ENSSFOT00015053021.1	ctnna1-210	2468	483aa	ENSSFOP00015072192.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C9WAP5	-
ENSSFOT00015070708.1	ctnna1-205	2116	499aa	ENSSFOP00015043948.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C9SX47	-

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Summary

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