Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: opn1sw2 ENSSFOG00015009411

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Description

opsin 1 (cone pigments), short-wave-sensitive 2 [Source:ZFIN;Acc:ZDB-GENE-990604-40]

Location

Primary_assembly 22: 5,528,041-5,534,803 reverse strand.

fSclFor1.1:LR584087.1

About this gene

This gene has 10 transcripts (splice variants), 113 orthologues and 31 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSFOT00015053140.1	opn1sw2-205	1203	400aa	ENSSFOP00015066880.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C9VZN8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSFOT00015067457.1	opn1sw2-206	1080	359aa	ENSSFOP00015043991.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C9T6V0	-
ENSSFOT00015054391.1	opn1sw2-202	1074	357aa	ENSSFOP00015061258.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C9UAG1	-
ENSSFOT00015054350.1	opn1sw2-208	1074	357aa	ENSSFOP00015074592.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C9WGC0	-
ENSSFOT00015073151.1	opn1sw2-209	1074	357aa	ENSSFOP00015072993.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0CIV3	-
ENSSFOT00015069267.1	opn1sw2-204	1050	349aa	ENSSFOP00015071625.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0CI66	-
ENSSFOT00015070343.1	opn1sw2-210	1038	345aa	ENSSFOP00015041961.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C9T4J3	-
ENSSFOT00015052928.1	opn1sw2-207	1035	344aa	ENSSFOP00015046705.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C9T837	-
ENSSFOT00015047207.1	opn1sw2-201	1029	342aa	ENSSFOP00015075469.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C9WL08	-
ENSSFOT00015014787.2	opn1sw2-203	1023	340aa	ENSSFOP00015014613.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C9V294	-

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Summary

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