Transcript: ENSRNOT00000113938.2 Hcfc1-202

Description

host cell factor C1 [Source:RGD Symbol;Acc:1563804]

Gene Synonyms

HCF, HCF-1, LOC100911260, LOC363519, RGD1563804

Location

About this transcript

This transcript has 26 exons, is annotated with 49 domains and features, is associated with 2 variant alleles and maps to 277 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000113938.2	Hcfc1-202	8942	2091aa	ENSRNOP00000084541.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A285	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000112258.2	Hcfc1-201	7035	2022aa	ENSRNOP00000081395.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZS53 A0A8L2UQY5	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 26, Coding exons: 26, Transcript length: 8,942 bps, Translation length: 2,091 residues

Version

ENSRNOT00000113938.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.