Transcript: ENSRNOT00000107335.1 Itgae-204

Description

integrin subunit alpha E [Source:RGD Symbol;Acc:621644]

Gene Synonyms

ENSRNOG00000070390

Location

About this transcript

This transcript has 29 exons, is annotated with 35 domains and features, is associated with 530 variant alleles and maps to 62 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000107335.1	Itgae-204	3388	1096aa	ENSRNOP00000091576.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ACC3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000115835.1	Itgae-205	4002	1028aa	ENSRNOP00000095883.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y1Q1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 29, Coding exons: 28, Transcript length: 3,388 bps, Translation length: 1,096 residues

Version

ENSRNOT00000107335.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.