Transcript: ENSRNOT00000107179.1 Col2a1-202

Description

collagen type II alpha 1 chain [Source:RGD Symbol;Acc:2375]

Gene Synonyms

CG2A1A, COLLII

Location

About this transcript

This transcript has 54 exons, is annotated with 56 domains and features, is associated with 233 variant alleles and maps to 397 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000107179.1	Col2a1-202	4601	1487aa	ENSRNOP00000094699.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AM44	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000086062.2	Col2a1-201	4538	1419aa	ENSRNOP00000071077.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LRM7	-

Summary

Statistics

Exons: 54, Coding exons: 54, Transcript length: 4,601 bps, Translation length: 1,487 residues

Version

ENSRNOT00000107179.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.