Transcript: ENSRNOT00000099913.2 Atp8a1-202

Description

ATPase phospholipid transporting 8A1 [Source:RGD Symbol;Acc:1309619]

Gene Synonyms

LOC289615

Location

About this transcript

This transcript has 30 exons, is annotated with 48 domains and features, is associated with 1013 variant alleles and maps to 341 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000099913.2	Atp8a1-202	7407	985aa	ENSRNOP00000077596.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZKC1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000044017.7	Atp8a1-201	7395	984aa	ENSRNOP00000039929.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LUT4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 30, Coding exons: 30, Transcript length: 7,407 bps, Translation length: 985 residues

Version

ENSRNOT00000099913.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.