Transcript: ENSRNOT00000099330.3 Lamp2-203

Description

lysosomal-associated membrane protein 2 [Source:RGD Symbol;Acc:2990]

Gene Synonyms

LAMP-2, LGP-110, LGP-96, LGP-B

Location

Primary_assembly X: 122,053,669-122,087,675 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 24 domains and features, is associated with 105 variant alleles and maps to 126 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000000164.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000107735.2	Lamp2-205	2350	412aa	ENSRNOP00000092818.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AHB3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000162208.1	Lamp2-206	2299	395aa	ENSRNOP00000105539.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000105324.2	Lamp2-204	1920	392aa	ENSRNOP00000092012.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AD73 A0A8I6ADS7	-
ENSRNOT00000099330.3	Lamp2-203	1791	411aa	ENSRNOP00000095159.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AMZ0	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000000177.7	Lamp2-201	1747	411aa	ENSRNOP00000000177.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P17046	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000095944.2	Lamp2-202	1292	393aa	ENSRNOP00000088297.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A5X8	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,791 bps, Translation length: 411 residues

Version

ENSRNOT00000099330.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSRNOT00000099330.3 Lamp2-203

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Transcript: ENSRNOT00000099330.3 Lamp2-203

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