Transcript: ENSRNOT00000096837.2 Zeb1-203

Description

zinc finger E-box binding homeobox 1 [Source:RGD Symbol;Acc:3831]

Gene Synonyms

TCF-8, Tcf8, Zfhx1a, deltaEF1, zfhep

Location

Primary_assembly 17: 56,644,397-56,810,745 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 61 domains and features, is associated with 567 variant alleles and maps to 209 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000017863.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000173987.1	Zeb1-205	5970	1351aa	ENSRNOP00000100713.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000024336.9	Zeb1-201	5315	1092aa	ENSRNOP00000024336.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q62947-1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000096837.2	Zeb1-203	5081	1042aa	ENSRNOP00000086424.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A3L9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000139666.1	Zeb1-204	3032	1009aa	ENSRNOP00000105892.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7TP68	-
ENSRNOT00000046013.6	Zeb1-202	2990	995aa	ENSRNOP00000049343.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9PT24	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 5,081 bps, Translation length: 1,042 residues

Version

ENSRNOT00000096837.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Upcoming Ensembl Platform Transition

Transcript: ENSRNOT00000096837.2 Zeb1-203

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Transcript: ENSRNOT00000096837.2 Zeb1-203

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