Transcript: ENSRNOT00000089729.3 Caly-201

Description

calcyon neuron-specific vesicular protein [Source:RGD Symbol;Acc:621719]

Gene Synonyms

Drd1ip

Location

About this transcript

This transcript has 6 exons, is annotated with 13 domains and features, is associated with 77 variant alleles and maps to 113 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000165432.1	Caly-202	1207	260aa	ENSRNOP00000109106.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000089729.3	Caly-201	1030	226aa	ENSRNOP00000069564.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HXF2 P58821	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 6, Coding exons: 4, Transcript length: 1,030 bps, Translation length: 226 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P58821

Version

ENSRNOT00000089729.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.