Transcript: ENSRNOT00000087404.3 C1qtnf1-201

Description

C1q and TNF related 1 [Source:RGD Symbol;Acc:1359204]

Gene Synonyms

Ctrp1, MGC94614

Location

About this transcript

This transcript has 4 exons, is annotated with 23 domains and features, is associated with 127 variant alleles and maps to 152 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000166764.1	C1qtnf1-204	2737	332aa	ENSRNOP00000109854.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000087404.3	C1qtnf1-201	2785	281aa	ENSRNOP00000070390.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JXS9 A6HL59 Q5XIG2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000154916.1	C1qtnf1-203	2666	292aa	ENSRNOP00000105698.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000168518.1	C1qtnf1-205	2611	290aa	ENSRNOP00000110327.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000140661.1	C1qtnf1-202	2504	318aa	ENSRNOP00000099350.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 2,785 bps, Translation length: 281 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5XIG2

Version

ENSRNOT00000087404.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.