Transcript: ENSRNOT00000085891.3 Phaf1-202

Description

phagophore assembly factor 1 [Source:RGD Symbol;Acc:621098]

Gene Synonyms

Lin-10, Lin10, RGD621098

Location

About this transcript

This transcript has 17 exons, is annotated with 4 domains and features, is associated with 167 variant alleles and maps to 186 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000020003.4	Phaf1-201	2880	422aa	ENSRNOP00000020003.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6IYM3 G3V7W8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000085891.3	Phaf1-202	2932	407aa	ENSRNOP00000069827.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JWC6	-
ENSRNOT00000137593.1	Phaf1-203	1716	417aa	ENSRNOP00000111570.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 17, Coding exons: 16, Transcript length: 2,932 bps, Translation length: 407 residues

Version

ENSRNOT00000085891.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.