Transcript: ENSRNOT00000082592.3 Prom1-202

Description

prominin 1 [Source:RGD Symbol;Acc:69367]

Gene Synonyms

CD133, MGC156650, Prom

Location

Primary_assembly 14: 71,202,336-71,307,002 forward strand.

About this transcript

This transcript has 27 exons, is annotated with 35 domains and features, is associated with 563 variant alleles and maps to 221 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000003098.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000083701.3	Prom1-203	3920	866aa	ENSRNOP00000069832.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JWD0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000113497.2	Prom1-206	3893	857aa	ENSRNOP00000080859.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZQT1	-
ENSRNOT00000163101.1	Prom1-208	3859	810aa	ENSRNOP00000110983.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000082592.3	Prom1-202	3674	841aa	ENSRNOP00000071297.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K044	-
ENSRNOT00000004231.8	Prom1-201	3643	841aa	ENSRNOP00000004231.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q91XN5	-
ENSRNOT00000118243.2	Prom1-207	3087	808aa	ENSRNOP00000097023.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GLV7	-
ENSRNOT00000084322.3	Prom1-205	2948	834aa	ENSRNOP00000068615.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JT89	-
ENSRNOT00000084274.3	Prom1-204	1356	85aa	ENSRNOP00000071743.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0JN22	-

Summary

Statistics

Exons: 27, Coding exons: 25, Transcript length: 3,674 bps, Translation length: 841 residues

Version

ENSRNOT00000082592.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Upcoming Ensembl Platform Transition

Transcript: ENSRNOT00000082592.3 Prom1-202

Summary

About Us

Get help

Our sister sites

Follow us

Upcoming Ensembl Platform Transition

Favourite species

All species

Recent locations

Transcript: ENSRNOT00000082592.3 Prom1-202

Summary

About Us

Get help

Our sister sites

Follow us