Transcript: ENSRNOT00000074725.3 Amigo1-201

Description

adhesion molecule with Ig like domain 1 [Source:RGD Symbol;Acc:1303079]

Gene Synonyms

AMIGO-1, alivin-2

Location

Primary_assembly 2: 198,511,039-198,521,146 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 41 domains and features, is associated with 41 variant alleles and maps to 158 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000045665.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000074725.3	Amigo1-201	9686	493aa	ENSRNOP00000066608.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HUY4 Q80ZD7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000148498.1	Amigo1-202	9391	493aa	ENSRNOP00000100732.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HUY4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000156175.1	Amigo1-203	1761	493aa	ENSRNOP00000109871.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HUY4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 9,686 bps, Translation length: 493 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q80ZD7

Version

ENSRNOT00000074725.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Upcoming Ensembl Platform Transition

Transcript: ENSRNOT00000074725.3 Amigo1-201

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Transcript: ENSRNOT00000074725.3 Amigo1-201

Summary

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