Transcript: ENSRNOT00000074493.3 Ccdc71-201

Description

coiled-coil domain containing 71 [Source:RGD Symbol;Acc:1566341]

Gene Synonyms

MGC116171

Location

Primary_assembly 8: 118,034,756-118,046,209 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 14 domains and features, is associated with 25 variant alleles and maps to 96 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000048718.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000134648.1	Ccdc71-204	21262	436aa	ENSRNOP00000100619.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6I358	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000102898.2	Ccdc71-203	7426	436aa	ENSRNOP00000092360.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6I358 Q4V7C4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000100156.2	Ccdc71-202	6901	436aa	ENSRNOP00000097250.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6I358 Q4V7C4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000074493.3	Ccdc71-201	2727	436aa	ENSRNOP00000065526.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2QWS1 A6I358	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSRNOT00000150571.1	Ccdc71-205	2179	436aa	ENSRNOP00000108532.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6I358	-

Summary

Statistics

Exons: 3, Coding exons: 1, Transcript length: 2,727 bps, Translation length: 436 residues

Version

ENSRNOT00000074493.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSRNOT00000074493.3 Ccdc71-201

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Transcript: ENSRNOT00000074493.3 Ccdc71-201

Summary

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