Transcript: ENSRNOT00000074366.4 Cacna1s-201

Description

calcium voltage-gated channel subunit alpha1 S [Source:RGD Symbol;Acc:70983]

Gene Synonyms

Cchl1a3, LOC501856, LOC682930, RGD1565743, ROB1

Location

About this transcript

This transcript has 44 exons, is annotated with 117 domains and features, is associated with 257 variant alleles and maps to 116 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000074366.4	Cacna1s-201	6129	1852aa	ENSRNOP00000067264.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M0RCE9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000116181.2	Cacna1s-202	6066	1831aa	ENSRNOP00000078008.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y8D5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 44, Coding exons: 44, Transcript length: 6,129 bps, Translation length: 1,852 residues

Version

ENSRNOT00000074366.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.