Transcript: ENSRNOT00000072729.5 Hhat-201

Description

hedgehog acyltransferase [Source:RGD Symbol;Acc:1311746]

Gene Synonyms

LOC289344, RGD1311746

Location

Primary_assembly 13: 106,541,866-106,811,563 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 37 domains and features, is associated with 1277 variant alleles and maps to 91 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000003925.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000100318.2	Hhat-202	3036	570aa	ENSRNOP00000090530.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GIY5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000130221.1	Hhat-203	1992	543aa	ENSRNOP00000106124.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000072729.5	Hhat-201	1709	544aa	ENSRNOP00000065563.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M0R7X5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 1,709 bps, Translation length: 544 residues

Version

ENSRNOT00000072729.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSRNOT00000072729.5 Hhat-201

Summary

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Transcript: ENSRNOT00000072729.5 Hhat-201

Summary

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