Transcript: ENSRNOT00000072580.5 Ecscr-201

Description

endothelial cell surface expressed chemotaxis and apoptosis regulator [Source:RGD Symbol;Acc:1594804]

Gene Synonyms

Aria, Ecscr-ps1, LOC689248

Location

Primary_assembly 18: 27,583,498-27,593,195 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 22 domains and features, is associated with 118 variant alleles and maps to 120 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000039593.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000120258.2	Ecscr-204	1578	244aa	ENSRNOP00000079454.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6G5C4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000110568.2	Ecscr-203	1658	218aa	ENSRNOP00000088865.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A8X7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000072580.5	Ecscr-201	1567	224aa	ENSRNOP00000067313.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6J2Z3 M0RCJ4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000097911.2	Ecscr-202	821	208aa	ENSRNOP00000087965.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A6Y3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 1,567 bps, Translation length: 224 residues

Version

ENSRNOT00000072580.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSRNOT00000072580.5 Ecscr-201

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Transcript: ENSRNOT00000072580.5 Ecscr-201

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