Transcript: ENSRNOT00000071929.4 Rbpj-201

Description

recombination signal binding protein for immunoglobulin kappa J region [Source:RGD Symbol;Acc:1593096]

Gene Synonyms

LOC679028

Location

Primary_assembly 14: 61,551,366-61,647,437 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 19 domains and features, is associated with 324 variant alleles and maps to 189 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000046327.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000128294.1	Rbpj-206	5775	575aa	ENSRNOP00000109179.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000106059.2	Rbpj-203	5577	486aa	ENSRNOP00000093992.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AL64	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000103399.2	Rbpj-202	5517	491aa	ENSRNOP00000095583.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AN87	-
ENSRNOT00000118409.2	Rbpj-205	5488	487aa	ENSRNOP00000093252.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AFG7	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000155786.1	Rbpj-207	5310	474aa	ENSRNOP00000100531.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000071929.4	Rbpj-201	5306	485aa	ENSRNOP00000065485.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M0R7Q3	-
ENSRNOT00000117966.2	Rbpj-204	4278	480aa	ENSRNOP00000081140.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZUF4	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 5,306 bps, Translation length: 485 residues

Version

ENSRNOT00000071929.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSRNOT00000071929.4 Rbpj-201

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Transcript: ENSRNOT00000071929.4 Rbpj-201

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