Transcript: ENSRNOT00000068601.4 Vegfd-201

Description

vascular endothelial growth factor D [Source:RGD Symbol;Acc:620695]

Gene Synonyms

Figf, Vegf-d

Location

About this transcript

This transcript has 6 exons, is annotated with 13 domains and features, is associated with 238 variant alleles and maps to 181 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000068601.4	Vegfd-201	1494	326aa	ENSRNOP00000058883.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6K2L1 G3V9S8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000152015.1	Vegfd-202	1409	321aa	ENSRNOP00000104705.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,494 bps, Translation length: 326 residues

Version

ENSRNOT00000068601.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.