Transcript: ENSRNOT00000068413.5 Col11a1-201

Description

collagen type XI alpha 1 chain [Source:RGD Symbol;Acc:2372]

Location

About this transcript

This transcript has 67 exons, is annotated with 75 domains and features, is associated with 1380 variant alleles and maps to 544 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000164805.1	Col11a1-205	7826	1855aa	ENSRNOP00000104130.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000144283.1	Col11a1-202	7709	1816aa	ENSRNOP00000109210.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000068413.5	Col11a1-201	7673	1804aa	ENSRNOP00000061595.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P20909-1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000152644.1	Col11a1-203	7556	1765aa	ENSRNOP00000110050.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000160024.1	Col11a1-204	7427	1722aa	ENSRNOP00000103446.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 67, Coding exons: 67, Transcript length: 7,673 bps, Translation length: 1,804 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P20909

Version

ENSRNOT00000068413.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.