Transcript: ENSRNOT00000068381.5 Mecom-201

Description

MDS1 and EVI1 complex locus [Source:RGD Symbol;Acc:1310997]

Gene Synonyms

Evi1, LOC103691544, LOC294924, Mds1

Location

Primary_assembly 2: 115,350,362-115,393,038 forward strand.

About this transcript

This transcript has 13 exons, is annotated with 68 domains and features, is associated with 222 variant alleles and maps to 182 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000012645.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000107461.2	Mecom-205	5492	1242aa	ENSRNOP00000097813.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GM83	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000095020.2	Mecom-202	5821	1050aa	ENSRNOP00000091427.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AF72	-
ENSRNOT00000122679.1	Mecom-206	5794	1041aa	ENSRNOP00000109212.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000139439.1	Mecom-207	5319	1230aa	ENSRNOP00000109883.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000158911.1	Mecom-209	5241	1204aa	ENSRNOP00000107002.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000099354.2	Mecom-203	5121	1131aa	ENSRNOP00000095014.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ASQ3	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000145421.1	Mecom-208	4732	949aa	ENSRNOP00000112217.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000068381.5	Mecom-201	4550	1040aa	ENSRNOP00000060380.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZM26	-
ENSRNOT00000102002.2	Mecom-204	3812	794aa	ENSRNOP00000095216.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AT27	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 4,550 bps, Translation length: 1,040 residues

Version

ENSRNOT00000068381.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSRNOT00000068381.5 Mecom-201

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Transcript: ENSRNOT00000068381.5 Mecom-201

Summary

About Us

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