Transcript: ENSRNOT00000068171.5 Slc4a7-203

Description

solute carrier family 4 member 7 [Source:RGD Symbol;Acc:621208]

Gene Synonyms

NBC3, NBCn1

Location

Primary_assembly 15: 13,015,854-13,095,292 reverse strand.

About this transcript

This transcript has 26 exons, is annotated with 68 domains and features, is associated with 447 variant alleles and maps to 295 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000005957.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000008759.9	Slc4a7-201	7803	1254aa	ENSRNOP00000008759.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2Q3F3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000101025.2	Slc4a7-204	7701	1220aa	ENSRNOP00000097556.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AV46	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000049771.6	Slc4a7-202	7573	1215aa	ENSRNOP00000047758.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2UM25	-
ENSRNOT00000068171.5	Slc4a7-203	7494	1151aa	ENSRNOP00000063542.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2QV99	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary

Statistics

Exons: 26, Coding exons: 26, Transcript length: 7,494 bps, Translation length: 1,151 residues

Version

ENSRNOT00000068171.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Upcoming Ensembl Platform Transition

Transcript: ENSRNOT00000068171.5 Slc4a7-203

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Transcript: ENSRNOT00000068171.5 Slc4a7-203

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