Transcript: ENSRNOT00000067694.4 Depdc5-201

Description

DEP domain containing 5, GATOR1 subcomplex subunit [Source:RGD Symbol;Acc:1311535]

Gene Synonyms

LOC305464

Location

Primary_assembly 14: 81,956,777-82,087,246 reverse strand.

About this transcript

This transcript has 42 exons, is annotated with 27 domains and features, is associated with 33 variant alleles and maps to 335 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000018144.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000113787.2	Depdc5-204	8165	1600aa	ENSRNOP00000076509.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5YBC5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000101652.2	Depdc5-203	8104	1530aa	ENSRNOP00000086876.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A374	-
ENSRNOT00000067694.4	Depdc5-201	8099	1578aa	ENSRNOP00000061924.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4A362	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000085788.3	Depdc5-202	3392	1085aa	ENSRNOP00000073874.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K6M8	-

Summary

Statistics

Exons: 42, Coding exons: 41, Transcript length: 8,099 bps, Translation length: 1,578 residues

Version

ENSRNOT00000067694.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSRNOT00000067694.4 Depdc5-201

Summary

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Transcript: ENSRNOT00000067694.4 Depdc5-201

Summary

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