Transcript: ENSRNOT00000067511.4 Tnfsf13b-201

Description

TNF superfamily member 13b [Source:RGD Symbol;Acc:1561519]

Gene Synonyms

BAFF, LOC498666, RGD1561519, Tnlg7a

Location

Primary_assembly 16: 86,164,377-86,194,499 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 15 domains and features, is associated with 281 variant alleles and maps to 108 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000014464.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000067511.4	Tnfsf13b-201	1679	325aa	ENSRNOP00000062950.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6IWR8 D3ZFD8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000076737.4	Tnfsf13b-202	1622	306aa	ENSRNOP00000068118.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A096MJG3 A6IWR7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000089650.3	Tnfsf13b-203	1583	293aa	ENSRNOP00000073755.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K6C2 A0A0U5JXV5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,679 bps, Translation length: 325 residues

Version

ENSRNOT00000067511.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Upcoming Ensembl Platform Transition

Transcript: ENSRNOT00000067511.4 Tnfsf13b-201

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Transcript: ENSRNOT00000067511.4 Tnfsf13b-201

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