Transcript: ENSRNOT00000067087.3 Vps50-202

Description

VPS50 subunit of EARP/GARPII complex [Source:RGD Symbol;Acc:1304751]

Gene Synonyms

Ccdc132, LOC100911994, LOC312083, RGD1304751

Location

About this transcript

This transcript has 28 exons, is annotated with 12 domains and features, is associated with 147 variant alleles and maps to 246 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000067087.3	Vps50-202	3535	964aa	ENSRNOP00000059003.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LSG8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000096203.1	Vps50-204	3398	947aa	ENSRNOP00000093011.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GK25	-
ENSRNOT00000095718.1	Vps50-203	3340	899aa	ENSRNOP00000086543.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GE55	-
ENSRNOT00000064866.3	Vps50-201	3310	889aa	ENSRNOP00000061982.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZTE2	-

Summary

Statistics

Exons: 28, Coding exons: 28, Transcript length: 3,535 bps, Translation length: 964 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: F1LSG8

Version

ENSRNOT00000067087.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.