Transcript: ENSRNOT00000066542.6 Pcdh10-202

Description

protocadherin 10 [Source:RGD Symbol;Acc:1565811]

Gene Synonyms

LOC361943, RGD1565811

Location

Primary_assembly 2: 130,553,425-130,571,041 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 66 domains and features, is associated with 26 variant alleles and maps to 127 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000031974.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000066542.6	Pcdh10-202	4169	1088aa	ENSRNOP00000063045.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZRX7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000099777.2	Pcdh10-203	8254	1040aa	ENSRNOP00000078085.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5YC59	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000040187.6	Pcdh10-201	4498	1057aa	ENSRNOP00000042694.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1M6B6	-
ENSRNOT00000113130.2	Pcdh10-204	4213	1047aa	ENSRNOP00000096196.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GLZ0	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 4,169 bps, Translation length: 1,088 residues

Version

ENSRNOT00000066542.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSRNOT00000066542.6 Pcdh10-202

Summary

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Transcript: ENSRNOT00000066542.6 Pcdh10-202

Summary

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