Transcript: ENSRNOT00000066431.3 Rbfox2-201

Description

RNA binding fox-1 homolog 2 [Source:RGD Symbol;Acc:1311838]

Gene Synonyms

LOC362950, MGC156775, Rbm9

Location

Primary_assembly 7: 110,691,230-110,934,901 reverse strand.

About this transcript

This transcript has 14 exons, is annotated with 20 domains and features, is associated with 361 variant alleles and maps to 303 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000004688.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000066431.3	Rbfox2-201	6884	446aa	ENSRNOP00000063462.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1A5R1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000098506.2	Rbfox2-203	6841	435aa	ENSRNOP00000090738.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AED5 A6HSF3	-
ENSRNOT00000090370.3	Rbfox2-202	6758	382aa	ENSRNOP00000070842.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JYY7	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000113975.2	Rbfox2-204	6533	378aa	ENSRNOP00000081980.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZU26	-
ENSRNOT00000115642.2	Rbfox2-206	6437	346aa	ENSRNOP00000077840.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5XWK2	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000114650.2	Rbfox2-205	1695	407aa	ENSRNOP00000085442.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A065	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 6,884 bps, Translation length: 446 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A1A5R1

Version

ENSRNOT00000066431.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSRNOT00000066431.3 Rbfox2-201

Summary

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Transcript: ENSRNOT00000066431.3 Rbfox2-201

Summary

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