Transcript: ENSRNOT00000066281.4 Arhgef18-201

Description

Rho/Rac guanine nucleotide exchange factor 18 [Source:RGD Symbol;Acc:1311448]

Gene Synonyms

LOC304193

Location

Primary_assembly 12: 6,193,022-6,300,997 forward strand.

About this transcript

This transcript has 30 exons, is annotated with 41 domains and features, is associated with 870 variant alleles and maps to 210 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000028090.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000100968.2	Arhgef18-202	6423	1402aa	ENSRNOP00000089688.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ALJ4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSRNOT00000066281.4	Arhgef18-201	6420	1401aa	ENSRNOP00000062255.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LT94	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000110862.2	Arhgef18-203	6309	1402aa	ENSRNOP00000078753.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZLL3	-
ENSRNOT00000148939.1	Arhgef18-204	6095	1364aa	ENSRNOP00000099512.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000168177.1	Arhgef18-205	1515	505aa	ENSRNOP00000108312.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 30, Coding exons: 29, Transcript length: 6,420 bps, Translation length: 1,401 residues

Version

ENSRNOT00000066281.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSRNOT00000066281.4 Arhgef18-201

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Transcript: ENSRNOT00000066281.4 Arhgef18-201

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