Transcript: ENSRNOT00000066247.5 Patl1-201

Description

PAT1 homolog 1, processing body mRNA decay factor [Source:RGD Symbol;Acc:1305514]

Gene Synonyms

LOC361736, Pat1b, RGD1305514

Location

About this transcript

This transcript has 19 exons, is annotated with 17 domains and features, is associated with 93 variant alleles and maps to 270 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000066247.5	Patl1-201	4051	770aa	ENSRNOP00000059542.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B5DF93	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000164192.1	Patl1-203	4021	760aa	ENSRNOP00000109279.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000104600.2	Patl1-202	3898	763aa	ENSRNOP00000081398.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZRW2	-

Summary

Statistics

Exons: 19, Coding exons: 19, Transcript length: 4,051 bps, Translation length: 770 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: B5DF93

Version

ENSRNOT00000066247.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.