Transcript: ENSRNOT00000065600.5 Ttc3-201

Description

tetratricopeptide repeat domain 3 [Source:RGD Symbol;Acc:1308654]

Gene Synonyms

LOC360702

Location

Primary_assembly 11: 47,158,792-47,258,418 forward strand.

About this transcript

This transcript has 46 exons, is annotated with 51 domains and features, is associated with 440 variant alleles and maps to 243 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000001682.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000065600.5	Ttc3-201	7177	2000aa	ENSRNOP00000059742.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2QUD9 A6KPW4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000113628.2	Ttc3-203	7337	1991aa	ENSRNOP00000088126.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A4G2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000105771.2	Ttc3-202	6104	1947aa	ENSRNOP00000077352.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y675	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000139699.1	Ttc3-204	2134	319aa	ENSRNOP00000103098.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 46, Coding exons: 46, Transcript length: 7,177 bps, Translation length: 2,000 residues

Version

ENSRNOT00000065600.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSRNOT00000065600.5 Ttc3-201

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Transcript: ENSRNOT00000065600.5 Ttc3-201

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