Transcript: ENSRNOT00000065075.5 Ap1s2-201

Description

adaptor related protein complex 1 subunit sigma 2 [Source:RGD Symbol;Acc:1561862]

Gene Synonyms

LOC302671, RGD1561862

Location

Primary_assembly X: 34,204,603-34,228,529 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 176 domains and features, is associated with 73 variant alleles and maps to 134 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000038686.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000174079.1	Ap1s2-205	1484	160aa	ENSRNOP00000100135.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A5U3 A6K2M3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000065075.5	Ap1s2-201	1687	157aa	ENSRNOP00000063764.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6K2M2 F7F749	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000113986.2	Ap1s2-203	1484	160aa	ENSRNOP00000082726.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZVG9	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000147578.1	Ap1s2-204	1463	153aa	ENSRNOP00000100405.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000081652.3	Ap1s2-202	521	156aa	ENSRNOP00000070442.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JXX9	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,687 bps, Translation length: 157 residues

Version

ENSRNOT00000065075.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Upcoming Ensembl Platform Transition

Transcript: ENSRNOT00000065075.5 Ap1s2-201

Summary

About Us

Get help

Our sister sites

Follow us

Upcoming Ensembl Platform Transition

Favourite species

All species

Recent locations

Transcript: ENSRNOT00000065075.5 Ap1s2-201

Summary

About Us

Get help

Our sister sites

Follow us