Transcript: ENSRNOT00000064671.4 Jmjd6-201

Description

jumonji domain containing 6, arginine demethylase and lysine hydroxylase [Source:RGD Symbol;Acc:1305395]

Gene Synonyms

LOC360665, Ptdsr

Location

About this transcript

This transcript has 7 exons, is annotated with 10 domains and features, is associated with 42 variant alleles and maps to 137 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000064671.4	Jmjd6-201	2434	381aa	ENSRNOP00000062806.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2QWD0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000116096.2	Jmjd6-202	2383	364aa	ENSRNOP00000077039.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y5A5	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 2,434 bps, Translation length: 381 residues

Version

ENSRNOT00000064671.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.