Transcript: ENSRNOT00000064594.4 Lyc2-201

Description

lysozyme C type 2 [Source:RGD Symbol;Acc:1593616]

Gene Synonyms

LOC102549714, LOC688047, Lyz2, MGC188464

Location

About this transcript

This transcript has 5 exons, is annotated with 17 domains and features, is associated with 28 variant alleles and maps to 145 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000086821.2	Lyc2-202	1961	156aa	ENSRNOP00000076711.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y928	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000064594.4	Lyc2-201	1564	155aa	ENSRNOP00000059657.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2RYD4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 1,564 bps, Translation length: 155 residues

Version

ENSRNOT00000064594.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.